Author

Zeeshan Khaliq

Uppsala University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 1 Assay:ChIP-seq· 1 Approach:deep learning· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Assay:proteomics· 1 Approach:statistical model· 1 Organism:virus· 1

Frequent Co-Authors

Jan KomorowskiiD· 2 shared Claes WadeliusiD· 1 shared Husen Muhammad UmeriD· 1 shared Karolina Smolinska GarbulowskaiD· 1 shared Mikael Leijon· 1 shared Nour‐Al‐Dain MarzoukaiD· 1 shared Sándor Belák· 1 shared

Activity by Year

2016-2019 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 13 mutual co-author links

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2 shared papersGenomics

Jan KomorowskiORCID

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2 papers

Recent·Most cited

funMotifs: Tissue-specific transcription factor motifs

Husen Muhammad Umer, Karolina Smolinska Garbulowska, Nour‐Al‐Dain Marzouka, Zeeshan Khaliq, Claes Wadelius, Jan Komorowski

The paper introduces funMotifs, a framework to identify tissue-specific functional transcription factor motifs using genomic annotations and regulatory element activity scores, enabling variant analysis across multiple datasets.

bioRxiv · Jun 27, 2019 · PreprintGenomics

Identification of combinatorial and singular genomic signatures of host adaptation in influenza A H1N1 and H3N2 subtypes

Zeeshan Khaliq, Mikael Leijon, Sándor Belák, Jan Komorowski

The paper identifies combinatorial and singular amino acid signatures in influenza A H1N1 and H3N2 subtypes that distinguish avian and human host adaptation.

bioRxiv · Mar 20, 2016 · PreprintBioinformatics