Author

Ziyi Wen

Chinese Academy of Sciences

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Approach:contrastive learning· 1 Approach:deep learning· 1 Research Focus:dimensionality reduction· 1 Organism:human· 1 Organism:mouse· 1 Organism:rat· 1

Frequent Co-Authors

Ge YangiD· 1 shared Guole LiuiD· 1 shared Jiekai CheniD· 1 shared Lihui LiniD· 1 shared Quanyou CaiiD· 1 shared Tianyu WangiD· 1 shared Xiao Hua WangiD· 1 shared Yingying ZhaoiD· 1 shared

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2025-2025 · peak 1/yr

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9 top collaborators · 36 mutual co-author links

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1 shared paperBioinformatics

Ge YangORCID

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1 paper

Recent·Most cited

SCARF: Single Cell ATAC-seq and RNA-seq Foundation model

Guole Liu, Yongbing Zhao, Yingying Zhao, Tianyu Wang, Quanyou Cai, Xiao Hua Wang, Ziyi Wen, Lihui Lin, Ge Yang, Jiekai Chen

SCARF is a foundation model for integrating single-cell ATAC-seq and RNA-seq data, achieving state-of-the-art performance in cell representation and cross-omics tasks.

bioRxiv · Apr 7, 2025 · PreprintBioinformatics