Author

Koji Iwayama

Shiga UniversityORCID 0000-0001-5008-8379Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:gene regulatory network inference· 2 Organism:plant (other)· 2 Research Focus:benchmarking· 1 Research Focus:differential expression· 1 Approach:simulation· 1 Approach:statistical model· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Atsushi J. NaganoiD· 2 shared Yoichi HashidaiD· 2 shared Ayumi DeguchiiD· 1 shared Ayumi TezukaiD· 1 shared Dan Eiju· 1 shared Hiroki SaitoiD· 1 shared Makoto KashimaiD· 1 shared Ryota L Sakamoto· 1 shared

Activity by Year

2021-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 38 mutual co-author links

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2 shared papersPlant Biology

Atsushi J. NaganoORCID

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2 papers

Recent·Most cited

Plant BiologyPlant Molecular BiologyPeer-reviewedMar 28, 2025

Simulation study of factors affecting the accuracy of transcriptome models under complex environments

Dan Eiju, Yoichi Hashida, Taro Maeda…·Atsushi J. Nagano

This study identifies key factors affecting field transcriptome model accuracy through simulation and validation with real data, showing gene expression patterns, sample size, and environmental coverage are most influential.

1 citation

plant (other)bulk RNA-seq

𝕏 PostBluesky

BioinformaticsPlant and Cell PhysiologyPeer-reviewedJun 15, 2021

Genomic basis of transcriptome dynamics in rice under field conditions

Makoto Kashima, Ryota L Sakamoto, Hiroki Saito…·Atsushi J. Nagano

The paper identifies edQTLs in rice under field conditions and shows they can predict gene expression in different environments and complex genotypes.

21 citations

plant (other)bulk RNA-seq

𝕏 PostBluesky