Machine learning predictions improve identification of real-world cancer driver mutations
Thinh Ngoc Tran, Chris Fong, Karl Pichotta, Anisha Luthra, Ronglai Shen, Yuan Chen, Michele Waters, Susie Kim, Michael Fabian Berger, Gregory J. Riely, Marc Ladanyi, Debyani Chakravarty, Nikolaus D. Schultz, Justin Jee
The paper uses machine learning to identify cancer driver mutations, finding that methods incorporating protein structure or functional genomic data outperform those using only evolutionary data, and validates their predictions using real-world patient cohorts.
bioRxiv · Mar 31, 2024 · PreprintGenomics