Author

Mark Gibberd

Curtin UniversityORCID 0000-0001-5379-544XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Assay:long-read sequencing· 1 Organism:plant (other)· 1

Frequent Co-Authors

Kristina GagalovaiD· 2 shared Asiri Padukka VidanalageiD· 1 shared Eiko FurukiiD· 1 shared Fatima NaimiD· 1 shared Fiona L. KamphuisiD· 1 shared Huyen T. T. PhaniD· 1 shared Jade M Davis· 1 shared Kasia Rybak· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersMolecular Biology

Kristina GagalovaORCID

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2 papers

Recent·Most cited

Molecular BiologybioRxivPreprintJul 3, 2026

Transcriptomic analysis reveals SnTox8-mediated reprogramming of wheat defence signalling

Asiri Padukka Vidanalage, Kristina Gagalova, Eiko Furuki…·Huyen T. T. Phan

This study identifies SnTox8-mediated reprogramming of wheat defence signalling through transcriptomic analysis of two wheat genotypes, revealing mechanisms of effector-triggered susceptibility.

DOI 10.64898/2026.07.02.736222

bulk RNA-seqstatistical model

𝕏 PostBluesky

BioinformaticsBioinformatics AdvancesPeer-reviewedJan 1, 2026

Benchmarking methods for genome annotation using Nanopore direct RNA in a non-model crop plant

Jade M Davis, Kristina Gagalova, Lilian Vincis Pereira Sanglard…·Fatima Naim

This study benchmarks genome annotation tools using Nanopore dRNA data from a non-model crop plant, finding significant variation in performance and identifying novel transcripts.

1 citation

plant (other)long-read sequencing

𝕏 PostBluesky