Author

Friederike Wanke

University of TübingenORCID 0000-0001-6080-8800Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Assay:imaging· 2 Organism:plant (other)· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Organism:human· 1 Approach:statistical model· 1

Frequent Co-Authors

Gisela GabernetiD· 2 shared Klaus HarteriD· 2 shared Luis Kuhn CuellariD· 2 shared Sven NahnseniD· 2 shared Adrian Seyboldt· 1 shared Andreas FriedrichiD· 1 shared Julian S. WanneriD· 1 shared Kenneth Wayne BerendzeniD· 1 shared

Activity by Year

2019-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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2 shared papersBioinformatics

Gisela GabernetORCID

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2 papers

Recent·Most cited

BioinformaticsQuantitative Plant BiologyPeer-reviewedJan 1, 2024

nf-root: a best-practice pipeline for deep learning-based analysis of apoplastic pH in microscopy images of developmental zones in plantroot tissue

Julian S. Wanner, Luis Kuhn Cuellar, Luiselotte Rausch…·Sven Nahnsen

nf-root automates apoplastic pH analysis in plant root images using deep learning, achieving near-human performance and reducing analysis time.

3 citations

plant (other)imaging

𝕏 PostBluesky

BioinformaticsbioRxivPreprintDec 28, 2019

Efficient data management infrastructure for the integration of imaging and omics data in life science research

Luis Kuhn Cuellar, Andreas Friedrich, Gisela Gabernet…·Sven Nahnsen

The paper proposes a FAIR-compliant data management system integrating imaging and omics data using Service Oriented Architecture principles, demonstrating its use in plant biology and hepatocellular carcinoma studies.

3 citations

plant (other)human

𝕏 PostBluesky