Author

Monika Klara Kurpas

Silesian University of TechnologyORCID 0000-0001-7635-8437Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:statistical model· 2 Research Focus:variant calling· 2 Research Focus:clustering· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Assay:whole-exome sequencing· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Khanh Ngoc DinhiD· 2 shared Marek KimmeliD· 2 shared Roman JaksikiD· 2 shared Agnieszka AdamczykiD· 1 shared Andrew Koval· 1 shared Kaja MajchrzykiD· 1 shared Paweł KuśiD· 1 shared Peter Terranova· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersBioinformatics

Khanh Ngoc DinhORCID

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2 papers

Recent·Most cited

Accurate detection of tumor clonality and ongoing expansion mode from genomic data

Yanjie Chen, Roman Jaksik, Peter Terranova, Sara El Baghdadi, Andrew Koval, Monika Klara Kurpas, Simon Tavaré, Marek Kimmel, Khanh Ngoc Dinh

DECODE improves tumor clonality and expansion mode detection by accounting for sequencing biases and neutral tail in SFS, showing better performance on synthetic data and clinical relevance in glioma.

bioRxiv · Jun 19, 2026 · PreprintBioinformatics

Statistical and Evolutionary Analysis of Sequenced DNA from Breast Cancer FFPE Specimens

Monika Klara Kurpas, Paweł Kuś, Roman Jaksik, Khanh Ngoc Dinh, Agnieszka Adamczyk, Kaja Majchrzyk, Marek Kimmel

The paper analyzes FFPE breast cancer specimens to assess recoverable molecular evolution features using computational methods despite sequencing artifacts.

bioRxiv · Oct 4, 2025 · PreprintEvolutionary Biology