Author

Otun Saha

University of DhakaORCID 0000-0001-9159-0437Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:variant calling· 3 Assay:whole-genome sequencing· 3 Approach:statistical model· 2 Organism:virus· 2 Approach:deep learning· 1

Frequent Co-Authors

Md. Mizanur RahamaniD· 2 shared Md. Shahadat HossainiD· 2 shared A. Q. M. Sala Uddin PathaniD· 1 shared Atqiya Fariha· 1 shared Hasan Al RezaiD· 1 shared Israt Islam· 1 shared M. Anwar HossainiD· 1 shared M. Nazmul HoqueiD· 1 shared

Activity by Year

2020-2021 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

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2 shared papersBioinformatics

Md. Mizanur RahamanORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Temporal landscape of mutation accumulation in SARS-CoV-2 genomes from Bangladesh: possible implications from the ongoing outbreak in Bangladesh

Otun Saha, Israt Islam, Rokaiya Nurani Shatadru, Nadira Naznin Rakhi, Md. Shahadat Hossain, Md. Mizanur Rahaman

The paper analyzes SARS-CoV-2 genomic mutations from Bangladesh over 13 weeks, identifying common and unique mutations and their association with patient age and sex.

Virus Genes · Jul 12, 2021Peer-reviewedBioinformatics

Genome-wide identification and prediction of SARS-CoV-2 mutations show an abundance of variants: Integrated study of bioinformatics and deep neural learning.

Md. Shahadat Hossain, A. Q. M. Sala Uddin Pathan, Md Nur Islam, Mahafujul Islam Quadery Tonmoy, Mahmudul Islam Rakib, Md. Adnan Munim, Otun Saha, Atqiya Fariha, Hasan Al Reza, Maitreyee Roy, Newaz Mohammed Bahadur, Md. Mizanur Rahaman

This study identifies and predicts SARS-CoV-2 mutations using bioinformatics and deep learning, finding high mutation rates and future trends in mutation types.

Informatics in Medicine Unlocked · Jan 1, 2021Peer-reviewedBioinformatics

Genome-wide diversity and differentiation of two novel multidrug-resistant populations of Pasteurella multocida type B:2 from fowl cholera

Otun Saha, M. Rafiul Islam, M. Shaminur Rahman, M. Nazmul Hoque, M. Anwar Hossain, Munawar Sultana

This study characterizes two multidrug-resistant P. multocida strains from fowl cholera, identifying virulence factors and antimicrobial resistance genes through whole genome sequencing and pan-genome analysis.

bioRxiv · Aug 24, 2020 · PreprintGenomics