Author

Khi Pin Chua

Pacific Biosciences (United States)ORCID 0000-0002-0083-0181Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Research Focus:benchmarking· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Assay:long-read sequencing· 1 Approach:statistical model· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Egor DolzhenkoiD· 2 shared Michael A. EberleiD· 2 shared William J. RowelliD· 2 shared Zev N. KronenbergiD· 2 shared Aaron R. QuinlaniD· 1 shared Andrea GuarracinoiD· 1 shared Andrew W. CarrolliD· 1 shared Byunggil YooiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 40 mutual co-author links

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2 shared papersBioinformatics

Egor DolzhenkoORCID

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2 papers

Recent·Most cited

BioinformaticsPLoS Computational BiologyPeer-reviewedSep 2, 2026

Hunting for microsatellite instability in long-read data with Owl

Zev N. Kronenberg, Byunggil Yoo, Khi Pin Chua…·Michael A. Eberle

Owl quantifies microsatellite instability from long-read data, identifying MSI-high genomes and motif-specific patterns in cancer samples.

2 citationstop 3%

humanlong-read sequencing

GenomicsNature MethodsPeer-reviewedAug 1, 2025

The Platinum Pedigree: A long-read benchmark for genetic variants

Zev N. Kronenberg, Cillian Nolan, David Porubskỳ…·Michael A. Eberle

The paper creates a long-read benchmark for genetic variants using a large pedigree, improving variant calling performance and introducing new truth sets for tandem repeats and structural variants.

29 citationstop 1%

humanwhole-genome sequencing