Author

Aniket Mane

Simon Fraser UniversityORCID 0000-0002-0130-7149Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Organism:E. coli· 1 Approach:mixed model· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Cédric ChauveiD· 2 shared Aaron P. WhiteiD· 1 shared Gianluca Della VedovaiD· 1 shared Haley SandersoniD· 1 shared Paola BonizzoniiD· 1 shared Rahat ZaheeriD· 1 shared Robert Gerald BeikoiD· 1 shared Victor EpainiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 16 mutual co-author links

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2 shared papersGenomics

Cédric ChauveORCID

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2 papers

Recent·Most cited

A multi-flow approach for binning circular plasmids from short-reads assembly graphs

Victor Epain, Aniket Mane, Gianluca Della Vedova, Paola Bonizzoni, Cédric Chauve

The paper introduces PlasBin-HMF, a method for plasmid binning from short-read assemblies, which outperforms existing methods by preserving explainability.

Lecture notes in computer science · Jan 1, 2026Peer-reviewedGenomics

PlasEval: a framework for comparing and evaluating plasmid detection tools

Aniket Mane, Haley Sanderson, Aaron P. White, Rahat Zaheer, Robert Gerald Beiko, Cédric Chauve

PlasEval evaluates plasmid binning tools by comparing their results to ground truth or other methods using a dissimilarity measure.

BMC Bioinformatics · Nov 26, 2024Peer-reviewedBioinformatics