Author

Adib Afandi Abdullah

University of OxfordORCID 0000-0002-0468-2091Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:DNA methylation· 2 Approach:statistical model· 2 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Approach:simulation· 1

Frequent Co-Authors

Aleksandr B. SahakyaniD· 2 shared Patrick PflughauptiD· 2 shared Claudia FengiD· 1 shared Kairi MasudaiD· 1 shared

Activity by Year

2021-2024 · peak 1/yr

Co-Author Collaboration Network

4 top collaborators · 5 mutual co-author links

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2 shared papersBioinformatics

Aleksandr B. SahakyanORCID

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2 papers

Recent·Most cited

Quantum mechanical electronic and geometric parameters for DNA k-mers as features for machine learning

Kairi Masuda, Adib Afandi Abdullah, Patrick Pflughaupt, Aleksandr B. Sahakyan

The paper provides a database of quantum mechanical and geometric features for DNA k-mers and demonstrates their use in predicting A to C mutation rate constants.

Scientific Data · Aug 22, 2024Peer-reviewedBioinformatics

Structure-driven effects on genomic DNA damage propensity at G-quadruplex sites

Adib Afandi Abdullah, Claudia Feng, Patrick Pflughaupt, Aleksandr B. Sahakyan

The paper investigates how G-quadruplex structures influence DNA damage propensity at different sites and shows that damage patterns vary depending on G4 strength and strand localization.

bioRxiv · Dec 2, 2021 · PreprintGenomics