Setting the SCENE for Interpretable Cell-Gene Embeddings in Single-Cell RNA-seq
O. Møberg, Magnus Blom Petersen, Tue Herlau, Lars Erik Kristensen, Leon Eyrich Jessen, Morten Mørup
This paper introduces SCENE, a probabilistic model for embedding cells and genes in scRNA-seq data, achieving state-of-the-art performance and interpretable visualization.
bioRxiv · Sep 18, 2026 · PreprintBioinformatics