Author

José A. Valdes Franco

Cornell UniversityORCID 0000-0002-0887-5827Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Organism:zebrafish· 2 Assay:ChIP-seq· 1 Research Focus:gene regulatory network inference· 1 Research Focus:imputation· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Edward S. BuckleriD· 2 shared David TzengiD· 1 shared Joseph L. GageiD· 1 shared Lynn JohnsoniD· 1 shared M. Cinta RomayiD· 1 shared María Katherine Mejía-GuerraiD· 1 shared Peter J. BradburyiD· 1 shared Pinghua LiiD· 1 shared

Activity by Year

2020-2020 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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2 shared papersGenomics

Edward S. BucklerORCID

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2 papers

Recent·Most cited

A Maize Practical Haplotype Graph Leverages Diverse NAM Assemblies

José A. Valdes Franco, Joseph L. Gage, Peter J. Bradbury, Lynn Johnson, Zachary R. Miller, Edward S. Buckler, M. Cinta Romay

The paper constructs a maize pangenome haplotype graph (PHG) to improve genotype imputation accuracy across diverse germplasm using WGS and GBS data.

bioRxiv · Aug 31, 2020 · PreprintGenomics

The transcription regulatory code of a maize leaf

Xiaoyu Tu, María Katherine Mejía-Guerra, José A. Valdes Franco, David Tzeng, Po-Yu Chu, Xiuru Dai, Pinghua Li, Edward S. Buckler, Silin Zhong

This study uses ChIP-seq to map TF binding in maize leaves, reconstructs a regulatory network covering 77% of expressed genes, and shows its conserved evolution across species.

bioRxiv · Jan 7, 2020 · PreprintMolecular Biology