Author

Elizabeth Lewis

European Bioinformatics InstituteORCID 0000-0002-1142-1359Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cancer Biology· 1 Genetic & Genomic Medicine· 1 Genetics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 3 Assay:GWAS summary statistics· 3 Organism:human· 3 Approach:statistical model· 3 Research Focus:database / resource· 2 Research Focus:GWAS / association mapping· 2 Approach:benchmark study· 1 Approach:deep learning· 1

Frequent Co-Authors

Helen ParkinsoniD· 4 shared Aoife McMahoniD· 3 shared Laura Wiseman HarrisiD· 3 shared Michael InouyeiD· 2 shared Samuel A. LambertiD· 2 shared Santhi RamachandraniD· 2 shared Yue JiiD· 2 shared Abayomi MosakuiD· 1 shared

Activity by Year

2024-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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4 shared papersGenomics

Helen ParkinsonORCID

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4 papers

Recent·Most cited

GenomicsbioRxivPreprintSep 30, 2026

✦ In-depth digest

Predicted Effector Gene Aggregation, Standards and Unified Schema (PEGASUS): A Community Framework for Effector Gene Reporting

Aoife McMahon, Yue Ji, Maria C. Costanzo…·Laura Wiseman Harris

PEGASUS defines a community reporting standard for GWAS predicted effector genes: a metadata record, a full locus-by-gene evidence matrix, and a derived author-prioritised gene list.

DOI 10.64898/2026.06.16.731894

humanGWAS summary statistics

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Cancer BiologyJMIR Bioinformatics and BiotechnologyPeer-reviewedJun 30, 2025

Extracting knowledge from scientific texts on patient-derived cancer models using Large Language Models: algorithm development and validation

Jiarui Yao, Zinaida Perova, Tushar Mandloi…·Guergana Savova

This study develops and validates LLM-based methods to extract PDCM-related entities from scientific texts, showing soft prompting improves small open LLMs' performance.

2 citations

deep learninglarge language model

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GeneticsNucleic Acids ResearchPeer-reviewedOct 22, 2024

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The NHGRI-EBI GWAS Catalog: standards for reusability, sustainability and diversity

María Cerezo, Elliot Sollis, Yue Ji…·Laura Wiseman Harris

The GWAS Catalog now holds 625,113 curated SNP-trait associations from 6,921 publications plus >85K summary statistics datasets, with a new GWAS-SSF submission standard and GRCh38 harmonisation.

434 citationstop 1%

humanGWAS summary statistics

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Genetic & Genomic MedicinemedRxivPreprintMay 29, 2024

The Polygenic Score Catalog: new functionality and tools to enable FAIR research

Samuel A. Lambert, Benjamin Wingfield, Joel T. Gibson…·Michael Inouye

The paper introduces new features and tools for the PGS Catalog to enhance FAIR research, enabling reproducible and equitable polygenic score calculations.

37 citations

humanGWAS summary statistics

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