Angelika Schmidt

Gene regulatory network of human GM-CSF secreting T helper cells

The paper identifies gene regulatory networks in human GM-CSF-secreting CD4 T cells using ATAC-seq and RNA-seq data, linking them to autoimmune disease.

An Algorithmic Information Calculus for Causal Discovery and Reprogramming Systems

The paper introduces a new framework for causal discovery and system reprogramming using algorithmic information theory, applied to biological systems like E. coli and cell differentiation networks.

Predicting Causal Relationships from Biological Data: Applying Automated Casual Discovery on Mass Cytometry Data of Human Immune Cells

The paper applies causal discovery methods to mass cytometry data of human immune cells to predict causal relationships between signaling proteins and their responses to perturbations.