Andrew Hipp

Evolutionary dynamics of the pan-centromere architecture in oaks

The paper analyzes centromere evolution in oaks, showing lineage-specific expansion of QuCEN146 satellite drives turnover, while LTR-rich centromeres show low polymorphism due to suppressed recombination.

The Iberian white-oak syngameon as a legacy of introgression in southern Europe

The paper uses RAD-seq to study Iberian white oaks, revealing hybrid swarms and redefining species boundaries through introgression and phylogeography.

Resolving the oak tree of life: comparing RADseq and whole genome resequencing methods for oak phylogenetics

The paper compares RADseq and whole genome resequencing methods to resolve oak phylogeny and address uncertainties in divergence times and gene tree discordance.

Genetically based variation in fitness and carbon assimilation among bur oak populations

This study evaluates local adaptation and physiological responses of bur oak populations to warming climates through reciprocal transplant experiments across North America.

An updated infrageneric classification of the oaks: review of previous taxonomic schemes and synthesis of evolutionary patterns

This paper reviews oak classification schemes and proposes an updated classification based on molecular phylogenetics, morphological traits, and evolutionary history.

Introgression obscures and reveals historical relationships among the American live oaks

The paper uses genomic data to analyze introgression patterns in American live oaks, distinguishing true hybridizing lineages from false admixture signals.