Author

Caitlin Karniski

Pacific Biosciences (United States)ORCID 0000-0002-1377-5118Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:database / resource· 1 Organism:human· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Aaron M. WengeriD· 1 shared Aaron R. QuinlaniD· 1 shared Adam C. EnglishiD· 1 shared Chengpeng Bi· 1 shared David Lee NelsoniD· 1 shared Egor DolzhenkoiD· 1 shared Emily FarrowiD· 1 shared Fritz Joachim SedlazeckiD· 1 shared

Activity by Year

2023-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperGenomics

Aaron M. WengerORCID

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1 paper

Recent·Most cited

GenomicsbioRxivPreprintMay 12, 2023

Resolving the unsolved: Comprehensive assessment of tandem repeats at scale

Egor Dolzhenko, Adam C. English, Harriet Dashnow…·Michael A. Eberle

The paper introduces TRGT, a tool for tandem repeat genotyping, and a database of 937,122 TRs across 100 genomes, achieving high concordance and detecting repeat expansions, methylation, and mosaicism.

16 citations

humanwhole-genome sequencing

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