Author

Benjamin R. Holmes

Massachusetts Institute of TechnologyORCID 0000-0002-1444-445XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Assay:ChIP-seq· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Approach:statistical model· 1 Research Focus:variant effect prediction· 1

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David Kenneth GiffordiD· 1 shared Lin Lin· 1 shared Richard I. SherwoodiD· 1 shared

Activity by Year

2020-2020 · peak 1/yr

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3 top collaborators · 3 mutual co-author links

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1 shared paperGenomics

David Kenneth GiffordORCID

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1 paper

Recent·Most cited

High resolution discovery of regulatory DNA with synthetic wild-type and ablated genome constructs

Benjamin R. Holmes, Lin Lin, Richard I. Sherwood, David Kenneth Gifford

This study introduces STARR-scan, a computational method that identifies transcription factor motifs in synthetic DNA constructs linked to enhancer activity, revealing new regulators of the APOBEC-3B gene.

bioRxiv · Nov 2, 2020 · PreprintGenomics