Author

Sotiris Lamprinidis

University of CopenhagenORCID 0000-0002-1932-0528Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Research Focus:cell type annotation· 2 Research Focus:clustering· 2 Approach:deep learning· 2 Assay:imaging· 2 Approach:benchmark study· 1 Approach:contrastive learning· 1 Research Focus:dimensionality reduction· 1

Frequent Co-Authors

Abraham George SmithiD· 2 shared Jens PeterseniD· 2 shared Agata WlaszczykiD· 1 shared Anand SeethepalliiD· 1 shared Eusun HaniD· 1 shared Kristian Thorup‐KristenseniD· 1 shared Kyriaki Boulata· 1 shared Larry M. YorkiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

9 top collaborators · 30 mutual co-author links

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2 shared papersPlant Biology

Abraham George SmithORCID

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2 papers

Recent·Most cited

Plant BiologybioRxivPreprintMay 28, 2026

A Root Foundation Model for Zero-Shot Segmentation

Abraham George Smith, Sotiris Lamprinidis, Agata Wlaszczyk, Jens Petersen

The paper introduces a domain-specific foundation model for root segmentation, showing strong zero-shot and few-shot performance across multiple datasets.

DOI 10.64898/2026.05.14.725129

imagingdeep learning

Plant BiologybioRxivPreprintFeb 19, 2026

Transformers Outperform ConvNets for Root Segmentation: A Systematic Comparison Across Nine Datasets

Abraham George Smith, Sotiris Lamprinidis, Anand Seethepalli…·Jens Petersen

The paper compares Transformer and ConvNet models for root segmentation across nine datasets, finding Transformers significantly outperform ConvNets in accuracy and root-diameter agreement.

DOI 10.64898/2026.02.18.706562

plant (other)imaging