Author

Rajiv Movva

Massachusetts Institute of TechnologyORCID 0000-0002-2012-0849Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Anshul Bharat KundajeiD· 1 shared Avanti ShrikumariD· 1 shared Avantika LaliD· 1 shared Corey NoletiD· 1 shared Georgi K. MarinoviD· 1 shared John Zedlewski· 1 shared Johnny IsraeliiD· 1 shared Peyton Greenside· 1 shared

Activity by Year

2019-2022 · peak 1/yr

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10 top collaborators · 20 mutual co-author links

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1 shared paperGenomics

Anshul Bharat KundajeORCID

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2 papers

Recent·Most cited

Accelerating single-cell genomic analysis with GPUs

Corey Nolet, Avantika Lal, Rajesh Ilango, Taurean Dyer, Rajiv Movva, John Zedlewski, Johnny Israeli

The paper demonstrates the use of GPU computing with RAPIDS to accelerate single-cell genomic analysis workflows and provides open-source examples.

bioRxiv · May 26, 2022 · PreprintBioinformatics

Deciphering regulatory DNA sequences and noncoding genetic variants using neural network models of massively parallel reporter assays

Rajiv Movva, Peyton Greenside, Georgi K. Marinov, Surag Nair, Avanti Shrikumar, Anshul Bharat Kundaje

The paper introduces MPRA-DragoNN, a CNN model to predict regulatory DNA activity from MPRAs, identifies TF motifs, and explores variant effects in lipid-associated loci.

PLoS ONE · Jun 17, 2019Peer-reviewedGenomics