Author

Mohamad Kassab

Mohamed bin Zayed University of Artificial IntelligenceORCID 0000-0002-2047-8592Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:batch correction / integration· 1 Research Focus:benchmarking· 1 Research Focus:dimensionality reduction· 1 Assay:scRNA-seq· 1 Approach:statistical model· 1 Approach:variational autoencoder· 1

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Eduardo da Veiga BeltrameiD· 1 shared Luiz Henrique de Santana ManieroiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

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1 shared paperBioinformatics

Eduardo da Veiga BeltrameORCID

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1 paper

Recent·Most cited

BioinformaticsbioRxivPreprintFeb 12, 2026

A hyperparameter benchmark of VAE-based methods for scRNA-seq batch integration

Mohamad Kassab, Luiz Henrique de Santana Maniero, Eduardo da Veiga Beltrame

This study benchmarks VAE-based methods for scRNA-seq batch integration, finding dataset-dependent performance trade-offs and recommending hyperparameter settings for optimal results.

1 citation

scRNA-seqvariational autoencoder