Author

Alexandros Tsoupas

University of GenevaORCID 0000-0002-2302-4131Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 3 Assay:DNA methylation· 3 Organism:human· 3 Approach:statistical model· 2 Research Focus:clustering· 1 Research Focus:dimensionality reduction· 1 Research Focus:gene regulatory network inference· 1 Approach:simulation· 1

Frequent Co-Authors

Mathias CurratiD· 3 shared Carlos S. Reyna-BlancoiD· 2 shared Claudio S. QuilodrániD· 2 shared Daniel WegmanniD· 2 shared Jens BlöcheriD· 2 shared Joachim BürgeriD· 2 shared Alexandra BuzhilovaiD· 1 shared Andrea Zeeb‐LanziD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 41 mutual co-author links

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3 shared papersGenomics

Mathias CurratORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Tracing Neanderthal ancestry patterns through successive population expansions in Europe

Alexandros Tsoupas, Claudio S. Quilodrán, Jérémy Rio, Mathias Currat

This study uses a simulation framework to analyze how Neanderthal ancestry gradients in Europe were shaped by population expansions and interactions between Neanderthals, hunter-gatherers, and farmers.

bioRxiv · Feb 20, 2026 · PreprintGenomics

Local increases in admixture with hunter-gatherers followed the initial expansion of Neolithic farmers across continental Europe

Alexandros Tsoupas, Carlos S. Reyna-Blanco, Claudio S. Quilodrán, Jens Blöcher, Maxime Brami, Daniel Wegmann, Joachim Bürger, Mathias Currat

This study models the Neolithic expansion of farmers in Europe, showing increasing admixture with hunter-gatherers over time and estimating farmer population size relative to hunter-gatherers.

Science Advances · Aug 20, 2025Peer-reviewedGenomics

Between fishing and farming: palaeogenomic analyses reveal cross-cultural interactions triggered by the arrival of the Neolithic in the Danube Gorges

Zuzana Hofmanová, Carlos S. Reyna-Blanco, Camille de Becdelièvre, Ilektra Schulz, Jens Blöcher, Jelena V. Jovanovic, Laura Winkelbach, Sylwia Marta Figarska, Anna Schulz, Marko Porčić, Petr Květina, Alexandros Tsoupas, Mathias Currat, Alexandra Buzhilova, Fokke A. Gerritsen, , Daniel Wegmann

The paper reports admixture between Neolithic farmers and Mesolithic hunter-gatherers in the Danube Gorges, supported by palaeogenomic analysis and archaeological findings.

bioRxiv · Jun 24, 2022 · PreprintGenomics