Author

Catherine D. Carrillo

Canadian Food Inspection AgencyORCID 0000-0002-2334-8718Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:statistical model· 2 Organism:bacteria (other)· 1 Research Focus:database / resource· 1 Assay:metagenomics· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Alex WongiD· 1 shared Amie Wren-Hedgus· 1 shared Gitanjali AryaiD· 1 shared James A. RobertsoniD· 1 shared Janet T. LiniD· 1 shared John J. NashiD· 1 shared Lauren M. BradfordiD· 1 shared

Activity by Year

2019-2023 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 11 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperBioinformatics

Alex WongORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

An Optimized Pipeline for Detection of Salmonella Sequences in Shotgun Metagenomics Datasets

Lauren M. Bradford, Catherine D. Carrillo, Alex Wong

The paper develops a bioinformatic pipeline to detect Salmonella in metagenomic datasets with high sensitivity and specificity by optimizing software parameters and database choices.

bioRxiv · Jul 27, 2023 · PreprintBioinformatics

Development of a multi-locus typing scheme for an Enterobacteriaceae linear plasmid that mediates inter-species transfer of flagella

James A. Robertson, Janet T. Lin, Amie Wren-Hedgus, Gitanjali Arya, Catherine D. Carrillo, John J. Nash

The paper develops a multi-locus typing scheme for a plasmid mediating flagella transfer in Salmonella, identifies its homologs in 154 genomes, and demonstrates its utility in tracking plasmid lineages.

PLoS ONE · Nov 18, 2019Peer-reviewedGenomics