Author

Kosuke Fujimoto

Collaborative Research Institute for Innovative Microbiology, The University of TokyoORCID 0000-0002-2948-549XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Approach:deep learning· 1 Research Focus:gene regulatory network inference· 1 Assay:metagenomics· 1 Research Focus:variant calling· 1 Research Focus:variant effect prediction· 1

Frequent Co-Authors

Rui YamaguchiiD· 1 shared Satoru MiyanoiD· 1 shared Satoshi UematsuiD· 1 shared Seiya ImotoiD· 1 shared Yaozhong ZhangiD· 1 shared Zeheng BaiiD· 1 shared

Activity by Year

2022-2022 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 15 mutual co-author links

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1 shared paperBioinformatics

Rui YamaguchiORCID

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1 paper

Recent·Most cited

Identification of bacteriophage genome sequences with representation learning

Zeheng Bai, Yaozhong Zhang, Satoru Miyano, Rui Yamaguchi, Kosuke Fujimoto, Satoshi Uematsu, Seiya Imoto

The paper introduces INHERIT, a deep learning model that combines database-based and alignment-free methods for phage identification, achieving an F1-score of 0.9932 on a benchmark dataset.

Bioinformatics · Aug 3, 2022Peer-reviewedBioinformatics