Chen Chen

Enhancing AlphaFold-Multimer-based Protein Complex Structure Prediction with MULTICOM in CASP15

The paper introduces MULTICOM, a system that enhances AlphaFold-Multimer for protein complex structure prediction, achieving higher TM-scores in CASP15.

Improving AlphaFold2-based Protein Tertiary Structure Prediction with MULTICOM in CASP15

The paper improves AlphaFold2-based protein structure prediction using MULTICOM_refine, achieving higher accuracy in CASP15 compared to standard AlphaFold2.

3D-equivariant graph neural networks for protein model quality assessment

The paper introduces EnQA, a 3D-equivariant graph neural network for assessing protein model quality, achieving state-of-the-art performance and outperforming AlphaFold2's own scores.

Combination of deep neural network with attention mechanism enhances the explainability of protein contact prediction

This study introduces an attention-based convolutional neural network for protein contact prediction, showing improved interpretability and predictive performance on CASP13 targets.