Julien Chiquet

When can a joint species distribution model capture biotic interactions? A simulation study across interaction mechanisms and levels of model integration

This paper evaluates how well joint species distribution models capture biotic interactions through simulations across different interaction mechanisms and model integration levels.

Deep Generative Models for Discrete Genotype Simulation

This study evaluates deep generative models for simulating discrete genotype data, showing their ability to capture genetic patterns and preserve genotype-phenotype associations.

Zero-inflated Joint Species Distribution Models for improved partial-correlation network inference from community data

This paper introduces a zero-inflated JSDM model to improve partial-correlation network inference from community data by accounting for structural zeros.

Harnessing multivariate, penalized regression methods for genomic prediction and QTL detection to cope with climate change affecting grapevine

The paper compares genomic prediction and QTL detection methods in grapevine under climate change, finding penalized regression methods like Elastic Net to be effective for prediction and QTL discovery.