Author

Jie‐Fu Chen

Memorial Sloan Kettering Cancer CenterORCID 0000-0002-4036-6969Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Cancer Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Aasiya Islam· 1 shared Ahmet DoǧaniD· 1 shared Andrew T. AukermaniD· 1 shared Angela Rose BrannoniD· 1 shared Anika Begum· 1 shared Areej AlsaafiniD· 1 shared Arfath Pasha· 1 shared Armaan Kohli· 1 shared

Activity by Year

2025-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperCancer Biology

Aasiya Islam

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1 paper

Recent·Most cited

Integrated histopathologic modeling of detailed tumor subtypes and actionable biomarkers

Kevin M Boehm, Madison Darmofal, Arfath Pasha, Andrew T. Aukerman, Raymond S. Lim, Evan Seffar, Tom Pollard, Natasha Rekhtman, Jason C. Chang, Armaan Kohli, Darin Moore, Marta Ligero, Jianjiong Gao, Georgios Asimomitis, Anika Begum, , Francisco Sánchez-Vega

The paper develops Mosaic, a machine learning system that classifies tumors into detailed subtypes and identifies molecular phenotypes using histopathologic and genomic data from a large patient cohort.

bioRxiv · Aug 14, 2025 · PreprintCancer Biology