Author

Md Ruhul Amin

Florida Atlantic UniversityORCID 0000-0002-4282-5153Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:deep learning· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:variant effect prediction· 2 Assay:whole-genome sequencing· 2 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Michael DeGiorgioiD· 3 shared Sandipan Paul ArnabiD· 3 shared Cindy G. SantanderiD· 1 shared Mahmudul HasaniD· 1 shared Mohammad KhaniD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

5 top collaborators · 8 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersGenomics

Michael DeGiorgioORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Multi-scale haplotype signatures distinguish among evolutionary processes

Mohammad Khan, Michael DeGiorgio, Sandipan Paul Arnab, Cindy G. Santander, Md Ruhul Amin

SHADES, a deep learning framework, distinguishes evolutionary processes like neutrality, selection, and introgression using haplotype data from humans, outperforming existing methods.

bioRxiv · Oct 31, 2026 · PreprintGenomics

Tensor decomposition based feature extraction and classification to detect natural selection from genomic data

Md Ruhul Amin, Mahmudul Hasan, Sandipan Paul Arnab, Michael DeGiorgio

This paper introduces T-REx, a method using tensor decomposition to extract features from haplotype images for detecting natural selection, showing high accuracy in simulated scenarios.

Molecular Biology and Evolution · Sep 29, 2023Peer-reviewedGenomics

Uncovering footprints of natural selection through time-frequency analysis of genomic summary statistics

Sandipan Paul Arnab, Md Ruhul Amin, Michael DeGiorgio

This paper applies time-frequency analysis to genomic summary statistics and uses convolutional neural networks to detect natural selection signals with high accuracy.

bioRxiv · Oct 5, 2022 · PreprintGenomics