Author

Miriam Ayla Goldman

Gladstone InstitutesORCID 0000-0002-4702-1365Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:metagenomics· 2 Approach:statistical model· 2 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Chunyu ZhaoiD· 2 shared Katherine S. PollardiD· 2 shared Boris DimitroviD· 1 shared Stephen NayfachiD· 1 shared

Activity by Year

2022-2025 · peak 1/yr

Co-Author Collaboration Network

4 top collaborators · 6 mutual co-author links

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2 shared papersBioinformatics

Chunyu ZhaoORCID

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2 papers

Recent·Most cited

Improved detection of microbiome-disease associations via population structure-aware generalized linear mixed effects models (microSLAM)

Miriam Ayla Goldman, Chunyu Zhao, Katherine S. Pollard

microSLAM identifies microbiome-disease associations by analyzing gene presence/absence across strains, revealing 49 species and 83 genes linked to IBD.

PLoS Computational Biology · May 27, 2025Peer-reviewedBioinformatics

MIDAS2: Metagenomic Intra-species Diversity Analysis System

Chunyu Zhao, Boris Dimitrov, Miriam Ayla Goldman, Stephen Nayfach, Katherine S. Pollard

MIDAS2 improves metagenomic analysis by enhancing SNV and CNV detection with custom databases and paired-end reads, enabling efficient genotyping of large sample sets.

Bioinformatics · Oct 28, 2022Peer-reviewedBioinformatics