Author

Johann Joets

Centre National de la Recherche ScientifiqueORCID 0000-0002-5353-5100Unclaimed ORCID profile · follow to get notified of new preprints

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Johann Joets1 paper

Biology Disciplines

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Genomics· 1 Plant Biology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Organism:plant (other)· 2 Assay:whole-genome sequencing· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Clémentine VitteiD· 3 shared Anthony VenoniD· 2 shared Maud FagnyiD· 2 shared Olivier TurciD· 2 shared Stéphanie PateyroniD· 2 shared Agnès Rousselet· 1 shared Ali PiraniiD· 1 shared Aude Darracq· 1 shared

Activity by Year

2019-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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3 shared papersPlant Biology

Clémentine VitteORCID

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3 papers

Recent·Most cited

How to be dispensable: genomic and transcriptomic determinants in maize genes

Johann Joets, Maéva Mollion, Kévin Baudry, Maud Fagny, Olivier Turc, Llorenç Cabrera‐Bosquet, Sylvie Coursol, Claude Welcker, Peter Rogowsky, Harry Belcram, Agnès Rousselet, Anthony Venon, Sandrine Chaignon, Stéphanie Pateyron, Jérôme Laplaige, , Clémentine Vitte

The paper identifies genomic and transcriptomic factors determining gene dispensability in maize by analyzing a pan-gene set and transcriptomic profiles across multiple tissues.

bioRxiv · Apr 29, 2026 · PreprintPlant Biology

Identification of key tissue-specific, biological processes by integrating enhancer information in maize gene regulatory networks

Maud Fagny, Marieke L. Kuijjer, Maike E. Stam, Johann Joets, Olivier Turc, Julien Rozière, Stéphanie Pateyron, Anthony Venon, Clémentine Vitte

The paper integrates genomic, epigenomic, and transcriptomic data to model enhancer-driven gene regulatory networks in maize tissues, identifying tissue-specific transcription factor families and transposable element contributions.

Frontiers in Genetics · Jan 11, 2021Peer-reviewedSystems Biology

High throughput genotyping of structural variations in a complex plant genome using an original Affymetrix(R) Axiom(R) array

Clément Mabire, Jorge Duarte, Aude Darracq, Ali Pirani, Hélène Rimbert, Delphine Madur, Valérie Combes, Clémentine Vitte, Sébastien Praud, Nathalie Rivière, Johann Joets, Jean-Philippe Pichon, Stéphane Nicolas

The paper develops a high-throughput method to genotype InDels in maize using an Affymetrix Axiom array, achieving high reliability and reproducibility.

BMC Genomics · Nov 13, 2019Peer-reviewedGenomics