Author

Ramani Duraiswami B

University of Maryland, College ParkORCID 0000-0002-5596-8460Unclaimed ORCID profile · follow to get notified of new preprints

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Bioinformatics· 1

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Research Focus:benchmarking· 1 Approach:contrastive learning· 1 Assay:whole-genome sequencing· 1

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Prashant PandeyiD· 1 shared Ryan SynkiD· 1 shared S. Cenk ŞahinalpiD· 1 shared

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2026-2026 · peak 1/yr

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1 shared paperBioinformatics

Prashant PandeyORCID

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1 paper

Recent·Most cited

BioinformaticsbioRxivPreprintOct 13, 2026

LOCALE: Local-Alignment Embeddings for Noise-Robust DNA Search at Scale

Ryan Synk, Prashant Pandey, S. Cenk Şahinalp, Ramani Duraiswami B

LOCALE improves DNA sequence search by learning variation-robust embeddings, outperforming existing methods on benchmark datasets and real biological variance tasks.

DOI 10.64898/2026.05.12.724581

whole-genome sequencingcontrastive learning