Author

Mark A. Travassos

University of Maryland, BaltimoreORCID 0000-0002-6045-3322Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Organism:plant (other)· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Christopher V. PloweiD· 2 shared Emily M. StuckeiD· 2 shared Kirsten E. LykeiD· 2 shared Shannon Takala‐HarrisoniD· 2 shared Abdoulaye Kassoum KoneiD· 1 shared Adam M. PhillippyiD· 1 shared Ahmadou Dembélé· 1 shared Amadou NiangalyiD· 1 shared

Activity by Year

2020-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersBioinformatics

Christopher V. PloweORCID

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Author profile →

2 papers

Recent·Most cited

Immune gene expression changes more during a malaria transmission season than between consecutive seasons.

Kieran Tebben, Salif Yirampo, Drissa Moriba Coulibaly, Abdoulaye Kassoum Kone, Matthew Brent Laurens, Emily M. Stucke, Ahmadou Dembélé, Youssouf Tolo, Karim Traoré, Amadou Niangaly, Andrea A. Berry, Bourèma Kouriba, Christopher V. Plowe, Ogobara K. Doumbo, Kirsten E. Lyke, , David Serre

The paper compares immune gene expression changes during a malaria transmission season versus between seasons in children with P. falciparum infections.

Microbiology Spectrum · Aug 20, 2024Peer-reviewedBioinformatics

Strains used in whole organism Plasmodium falciparum vaccine trials differ in genome structure, sequence, and immunogenic potential

Kara A. Moser, Elliott Franco Drábek, Ankit Dwivedi, Emily M. Stucke, Jonathan Crabtree, Antoine Dara, Zalak Shah, Matthew Adams, Tao Li, Priscila T. Rodrigues, Sergey Koren, Adam M. Phillippy, James B. Munro, Amed Ouattara, Benjamin C. Sparklin, , Joana Caldeira Fernandes da Silva

The paper compares genome structure, sequence, and immunogenic potential of Plasmodium falciparum strains used in vaccine trials and finds significant differences affecting vaccine efficacy.

Genome Medicine · Jan 8, 2020Peer-reviewedGenomics