Author

Shiheng Tao

Northwest A&F UniversityORCID 0000-0002-6076-6038Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Assay:metagenomics· 1 Organism:mouse· 1 Organism:rat· 1

Frequent Co-Authors

Haopeng YuiD· 2 shared Qing SuniD· 2 shared Huijie GaoiD· 1 shared Wenjing MengiD· 1 shared Yi ZhangiD· 1 shared Yi ZhangiD· 1 shared Yuanhui MaoiD· 1 shared

Activity by Year

2019-2020 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 15 mutual co-author links

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2 shared papersBioinformatics

Haopeng YuORCID

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2 papers

Recent·Most cited

RSVdb: A comprehensive database of transcriptome RNA structure

Haopeng Yu, Yi Zhang, Qing Sun, Huijie Gao, Shiheng Tao

RSVdb provides a database of transcriptome RNA structures from 8 species, enabling retrieval, visualization, prediction, and download of RNA structure data.

Briefings in Bioinformatics · Apr 8, 2020Peer-reviewedBioinformatics

Deciphering the rules of mRNA structure differentiation in vivo and in vitro with deep neural networks in Saccharomyces cerevisiae

Haopeng Yu, Wenjing Meng, Yuanhui Mao, Yi Zhang, Qing Sun, Shiheng Tao

This study uses a deep neural network to predict in vivo mRNA structural stability by analyzing six features, finding ribosome density as the most influential factor.

RNA Biology · May 23, 2019Peer-reviewedBioinformatics