Enhancing droplet-based single-nucleus RNA-seq resolution using the semi-supervised machine learning classifier DIEM
Marcus Alvarez, Elior Rahmani, Brandon Jew, Kristina M. Garske, Zong Miao, Jihane N. Benhammou, Chun Ye, Joseph R. Pisegna, Kirsi Hannele Pietiläinen, Eran Halperin, Päivi Pajukanta
The paper introduces DIEM, a semi-supervised machine learning classifier to remove debris-contaminated droplets in snRNA-seq, improving clustering quality across three datasets.
Scientific Reports · Jul 3, 2020Peer-reviewedBioinformatics