DenMark: A Bayesian Hierarchical Model for Identifying Cell-Density Correlated Genes from Spatial Transcriptomics
Mingchi Xu, Alexandra Mello Schmidt, Qihuang Zhang
DenMark identifies genes correlated with cell density in spatial transcriptomics data using a Bayesian hierarchical model, revealing density-related biological programs across tissues.
bioRxiv · Apr 4, 2026 · PreprintGenomics