Marie‐Anne Van Sluys

The paper develops a pipeline to analyze unmapped RNA-Seq reads from sugarcane inoculated with a pathogen and beneficial bacteria, identifying long non-coding RNAs and microbiome changes.

The paper provides a five-step protocol for studying multicopy genes in Physcomitrium patens, emphasizing internal controls and orthologous gene identification to improve RT-qPCR interpretation.

The paper creates the Pan-Grass Syntenic Gene Set (PGSGS), a database of orthologous and homeologous gene relationships across 17 grass species, to study genome evolution and improve functional genetic integration.

The paper shows that knocking down Tnt1 expression in tobacco leads to transcriptomic and phenotypic changes, suggesting Tnt1 regulates gene expression and plant development.