Martin Schlather

Accelerated matrix-vector multiplications for matrices involving genotype covariates with applications in genomic prediction

The paper develops optimized matrix-vector multiplication methods for genomic prediction, improving computational efficiency on GPUs and CPUs for large datasets.

MoBPS - Modular Breeding Program Simulator

MoBPS simulates breeding programs and compares their economic and genetic impacts using a modular, efficient framework with customizable modules.

Efficient Calculation of the Genomic Relationship Matrix

The paper presents an efficient algorithm for calculating the genomic relationship matrix, achieving 25x speedup over a double precision floating-point implementation.

Best Prediction of the Additive Genomic Variance in Random-Effects Models

The paper introduces a best prediction approach for additive genomic variance in random-effects models, incorporating linkage disequilibrium and improving upon existing methods.

HaploBlocker: Creation of subgroup specific haplotype blocks and libraries

HaploBlocker identifies subgroup-specific haplotype blocks and constructs libraries to represent genetic variability with fewer parameters than traditional methods.