Luis Daniel González-Vázquez

SRARec: A program for detecting recombination in sequencing reads and its application to uncover recombination patterns in SARS-CoV-2 and HIV-1

SRARec detects recombination in sequencing reads, revealing distinct breakpoint patterns in SARS-CoV-2 and HIV-1.

Forecasting protein evolution by integrating birth-death population models with structurally constrained substitution models

This paper forecasts protein evolution by integrating birth-death population models with structurally constrained substitution models, showing acceptable errors in folding stability predictions but larger errors in sequence predictions.