Johanna K. Björkroth

Censoring-aware Gaussian process modeling identifies time informative functional dynamics associated with spoilage status of modified atmosphere packaged broiler meat

This paper develops a censoring-aware Gaussian process framework to model metatranscriptomic data from broiler meat spoilage, linking functional dynamics to spoilage phases and predicting spoilage rates.

Longitudinal RNA Seq analyses reveal the prominent role of Vagococcus in broiler meat spoilage microbiome

This study uses longitudinal RNA-seq and metabolomics to identify Vagococcus proximus as a key active spoiler in broiler meat spoilage microbiomes.