Author

Edgar Wingender

GeneXplain (Germany)ORCID 0000-0002-7729-8453Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Approach:statistical model· 2

Frequent Co-Authors

Halima AlachramiD· 2 shared Tim BeißbarthiD· 2 shared Andrey RzhetskyiD· 1 shared Aram GalstyaniD· 1 shared Bohdan B. KhomtchoukiD· 1 shared Chambers BrendaniD· 1 shared Daniel Marcu· 1 shared Emily Sheng· 1 shared

Activity by Year

2020-2020 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 38 mutual co-author links

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2 shared papersBioinformatics

Halima AlachramORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintDec 9, 2020

Text mining-based word representations for biomedical data analysis and machine learning tasks

Halima Alachram, Hryhorii Chereda, Tim Beißbarth…·Philip Stegmaier

The paper develops word2vec-based embeddings from PubMed abstracts to capture biological relationships and improves metastatic event prediction using graph convolutional networks.

2 citations

statistical modelbenchmarking

𝕏 PostBluesky

Systems BiologybioRxivPreprintNov 5, 2020

NERO: A Biomedical Named-entity (Recognition) Ontology with a Large, Annotated Corpus Reveals Meaningful Associations Through Text Embedding

Kanix Wang, Robert Stevens, Halima Alachram…·Andrey Rzhetsky

This paper introduces NERO, a biomedical named-entity ontology with an annotated corpus, and demonstrates its utility through text embedding for discovering associations.

2 citations

statistical modelbenchmarking

𝕏 PostBluesky