Author

Jakub Karczmarski

Institute of Biochemistry and Biophysics, Polish Academy of SciencesORCID 0000-0002-7976-0365Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:host-pathogen & immune response· 1 Organism:human· 1 Assay:metabolomics· 1 Assay:metagenomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Anna DetmaniD· 1 shared Anna SikoraiD· 1 shared Anna Williams· 1 shared Daniel LaubitziD· 1 shared Emilia SamborowskaiD· 1 shared Gabriele SchiroiD· 1 shared Kinga Jakubowska· 1 shared Nicky Hickman· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperMicrobiology

Anna DetmanORCID

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1 paper

Recent·Most cited

MicrobiologyMicrobial Cell FactoriesPeer-reviewedAug 3, 2026

Dynamics and fermentation patterns of stool microbiota on simple carbon sources in in vitro batch cultures reveal dysbiosis in Crohn's disease.

Anna Detman, Gabriele Schiro, Rafał Filip…·Anna Sikora

This study shows that stool microbiota from Crohn's disease patients produce less butyrate and other SCFAs and more ethanol and amino acids in vitro, suggesting metabolic dysbiosis that could inform diagnostics.

DOI 10.1186/s12934-026-03052-4

humanmetagenomics