Author

Cyrille C. Thinnes

Ollscoil na Gaillimhe – University of GalwayORCID 0000-0002-8619-9537Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Systems Biology· 2

Signature Assays, Organisms & Methods

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Research Focus:database / resource· 2 Organism:human· 2 Assay:metagenomics· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1

Frequent Co-Authors

Almut HeinkeniD· 2 shared Bram NapiD· 2 shared Filippo MartinelliiD· 2 shared Ines ThieleiD· 2 shared Amy O’Brolchain· 1 shared Angeline Lagali· 1 shared Arianna BasileiD· 1 shared Celine GallagheriD· 1 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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2 shared papersSystems Biology

Almut HeinkenORCID

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2 papers

Recent·Most cited

The MicroMap is a network visualisation resource for microbiome metabolism

Cyrille C. Thinnes, Renee Waschkowitz, Eoghan Courtney, Eoghan Culligan, Katie Fahy, Ruby A. M. Ferrazza, Ciara Ferris, Angeline Lagali, Rebecca Lane, Colm Maye, Olivia Murphy, David Noone, Saoirse Ryan, Mihaela Bet, Maria C. Corr, , Ines Thiele

The paper introduces the MicroMap, a curated metabolic network visualization resource for microbiome metabolism, integrating with existing tools and providing educational and comparative capabilities.

bioRxiv · Feb 13, 2025 · PreprintSystems Biology

APOLLO: A genome-scale metabolic reconstruction resource of 247,092 diverse human microbes spanning multiple continents, age groups, and body sites

Almut Heinken, Tim Hulshof, Bram Nap, Filippo Martinelli, Arianna Basile, Amy O’Brolchain, Neil Francis O’Sullivan, Celine Gallagher, Eimer Magee, Francesca McDonagh, Ian Lalor, Maeve Bergin, Phoebe Evans, Rachel Daly, Ronan Farrell, , Ines Thiele

APOLLO provides 247,092 genome-scale metabolic models of human microbes, enabling strain-level taxonomic prediction and disease-associated metabolite analysis.

Cell Systems · Feb 1, 2025Peer-reviewedSystems Biology