Reference Regulatory Element-Guided Gene Expression Analysis for Mechanistic Inference of Gene Regulatory Networks
Lixin Ren, Ishita Debnath, Zhana Duren
This paper introduces REGA, a framework that uses reference regulatory elements to infer gene regulatory networks from expression data, showing improved performance across multiple benchmarks and applications.
bioRxiv · Jul 16, 2026 · PreprintBioinformatics