Author

Yuri V. Vyatkin

Novosibirsk State UniversityORCID 0000-0002-9056-8796Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:batch correction / integration· 1 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Assay:metagenomics· 1 Approach:statistical model· 1 Approach:variational autoencoder· 1

Frequent Co-Authors

Денис АнтонецiD· 2 shared Alexander Makarov· 1 shared Alexey Zakharov· 1 shared Dmitry N. ShtokaloiD· 1 shared Ekaterina KamanovaiD· 1 shared Evgeny Terentyev· 1 shared Maria Starchevskaya· 1 shared Nikolay RusskikhiD· 1 shared

Activity by Year

2020-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 25 mutual co-author links

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2 shared papersBioinformatics

Денис АнтонецORCID

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2 papers

Recent·Most cited

The metagenomic analysis of viral diversity in Colorado potato beetle public NGS data

Maria Starchevskaya, Ekaterina Kamanova, Yuri V. Vyatkin, Tatiana V. Tregubchak, Tatyana V. Bauer, С. А. Боднев, Ulyana N. Rotskaya, Olga V. Polenogova, Vadim Yu. Kryukov, Денис Антонец

The paper analyzes viral diversity in Colorado potato beetle samples using metagenomics to identify 3137 virus-positive contigs across 6 types, 17 orders, and 32 families of viruses.

Viruses · Jan 30, 2023Peer-reviewedBioinformatics

Style transfer with variational autoencoders is a promising approach to RNA-Seq data harmonization and analysis

Nikolay Russkikh, Денис Антонец, Dmitry N. Shtokalo, Alexander Makarov, Yuri V. Vyatkin, Alexey Zakharov, Evgeny Terentyev

This paper applies style transfer methods to RNA-Seq data harmonization and treatment outcome prediction, showing improved style and semantics prediction accuracy compared to existing approaches.

Bioinformatics · Jul 9, 2020Peer-reviewedBioinformatics