Author

Nancy Beth Carlisle

Lehigh UniversityORCID 0000-0002-9161-8556Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 6 Assay:imaging· 5 Research Focus:cell-cell communication· 3 Research Focus:clustering· 2 Approach:contrastive learning· 2 Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2

Frequent Co-Authors

Gregory A. FonzoiD· 6 shared Hua XieiD· 6 shared Yu ZhangiD· 6 shared Kanhao ZhaoiD· 4 shared Ricardo S. OsorioiD· 3 shared Xiaoyu TongiD· 3 shared Charles B. NemeroffiD· 2 shared Corey J. KelleriD· 2 shared

Activity by Year

2023-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 38 mutual co-author links

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6 shared papersNeuroscience

Gregory A. FonzoORCID

Mutual co-authors in cluster

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6 papers

Recent·Most cited

Early Brain Functional Connectivity Changes Induced by Antidepressants and Placebo

Xiaoyu Tong, Gregory A. Fonzo, Nancy Beth Carlisle, Hua Xie, Yevgeny Berdichevsky, Corey J. Keller, Desmond J. Oathes, Charles B. Nemeroff, Feng Vankee Lin, Yu Zhang

This study identifies early functional connectivity changes in MDD patients treated with antidepressants or placebo, revealing common and distinct treatment effects.

Nature Mental Health · Sep 18, 2026Peer-reviewedNeuroscience

Elucidating the neuropathological and molecular heterogeneity of amyloid-beta and tau in Alzheimer's disease through machine learning and transcriptomic integration

Kanhao Zhao, Hua Xie, Tovia Jacobs, Naomi Love Gaggi, Juan Fortea, Nancy Beth Carlisle, Gregory A. Fonzo, Kilian M. Pohl, Ricardo S. Osorio, Yu Zhang

This study uses machine learning and transcriptomic integration to identify brain network and molecular signatures associated with amyloid-beta and tau in Alzheimer's disease.

Alzheimer s & Dementia · Aug 1, 2026Peer-reviewedNeuroscience

Functional Connectome of Superagers Reveals Early Markers of Resilience and Vulnerability to Alzheimers Disease

Kanhao Zhao, Hua Xie, Gregory A. Fonzo, Nancy Beth Carlisle, Tovia Jacobs, Ricardo S. Osorio, Arpana Church, Feng Vankee Lin, Yu Zhang, the ADNI Study Group

This study identifies a functional connectivity signature, ARC, that distinguishes superagers from AD patients and predicts cognitive decline and amyloid-beta accumulation.

bioRxiv · Jul 20, 2025 · PreprintNeuroscience

Contrastive functional connectivity defines neurophysiology-informed symptom dimensions in major depression

Hao Zhu, Xiaoyu Tong, Nancy Beth Carlisle, Hua Xie, Corey J. Keller, Desmond J. Oathes, Feng Liu, Charles B. Nemeroff, Gregory A. Fonzo, Yu Zhang

This paper identifies two neurophysiology-informed symptom dimensions in MDD using contrastive functional connectivity analysis of fMRI data.

Cell Reports Medicine · May 28, 2025Peer-reviewedNeuroscience

Defining Dementia Subtypes Through Neuropsychiatric Symptom-Linked Brain Connectivity Patterns

Kanhao Zhao, Hua Xie, Gregory A. Fonzo, Nancy Beth Carlisle, Ricardo S. Osorio, Yu Zhang

The paper identifies dementia subtypes based on neuropsychiatric symptom-linked brain connectivity patterns using neuroimaging data.

bioRxiv · Jul 2, 2023 · PreprintNeuroscience

Dissecting Symptom-linked Dimensions of Resting-State Electroencephalographic Functional Connectivity in Autism with Contrastive Learning

Xiaoyu Tong, Hua Xie, Gregory A. Fonzo, Kanhao Zhao, Theodore Daniel Satterthwaite, Nancy Beth Carlisle, Yu Zhang

The paper identifies two EEG connectivity dimensions linked to ASD symptoms using contrastive learning and sparse canonical correlation analysis in 392 ASD samples.

bioRxiv · May 22, 2023 · PreprintNeuroscience