Author

Benjamin Tully

University of Southern CaliforniaORCID 0000-0002-9384-7635Unclaimed ORCID profile · follow to get notified of new preprints

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Benjamin Tully1 paper

Biology Disciplines

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Bioinformatics· 3

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:database / resource· 2 Research Focus:gene regulatory network inference· 2 Assay:metagenomics· 2 Research Focus:benchmarking· 1 Research Focus:differential expression· 1 Organism:fungi (other)· 1 Organism:human· 1

Frequent Co-Authors

Christopher J. NeelyiD· 2 shared Elaina D. GrahamiD· 1 shared Harriet AlexanderiD· 1 shared Juntao Zhong· 1 shared Oleksandr Kyrysyuk· 1 shared Rika E. AndersoniD· 1 shared Sarah K. HuiD· 1 shared Thaís Del Rosario HernándeziD· 1 shared

Activity by Year

2020-2024 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 14 mutual co-author links

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2 shared papersBioinformatics

Christopher J. NeelyORCID

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3 papers

Recent·Most cited

High transposase abundance in the deep ocean is linked to a particle-associated lifestyle

Juntao Zhong, Troy Osborn, Thaís Del Rosario Hernández, Oleksandr Kyrysyuk, Benjamin Tully, Rika E. Anderson

The paper links high transposase abundance in deep ocean microbes to a particle-associated lifestyle and defense-related gene expression.

mSystems · Feb 21, 2024Peer-reviewedBioinformatics

The high-throughput gene prediction of more than 1,700 eukaryote genomes using the software package EukMetaSanity

Christopher J. Neely, Sarah K. Hu, Harriet Alexander, Benjamin Tully

The paper introduces EukMetaSanity, a software package for high-throughput gene prediction in eukaryotic genomes, demonstrating reliable predictions for 1,700+ genomes including MAGs.

bioRxiv · Jul 25, 2021 · PreprintBioinformatics

MetaSanity: An integrated, customizable microbial genome evaluation and annotation pipeline

Christopher J. Neely, Elaina D. Graham, Benjamin Tully

MetaSanity integrates multiple microbial genome evaluation and annotation tools into a customizable pipeline to improve reproducibility and quality analysis of microbial genomes.

Bioinformatics · May 14, 2020Peer-reviewedBioinformatics