A Systematic Evaluation of Single-Cell Batch Integration Metrics and sBEE, A New Metric
Mekan Myradov, Aissa Houdjedj, Öznur Taştan, Hilal Kazan
The paper evaluates existing batch integration metrics in scRNA-seq and introduces sBEE, a new metric that provides more reliable assessments of batch mixing across diverse scenarios.
bioRxiv · Aug 9, 2026 · PreprintBioinformatics