Author

Kaitavjeet Chowdhary

Harvard UniversityORCID 0000-0002-9595-3706Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:deep learning· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Organism:mouse· 1 Research Focus:variant effect prediction· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Alexander SasseiD· 1 shared Anna E. SpiroiD· 1 shared Christophe O. BenoistiD· 1 shared Liang Yang· 1 shared Maria D. ChikinaiD· 1 shared Sara MostafaviiD· 1 shared Xinming TuiD· 1 shared

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2025-2025 · peak 1/yr

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7 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Alexander SasseORCID

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1 paper

Recent·Most cited

Deep genomic models of allele-specific measurements

Xinming Tu, Alexander Sasse, Kaitavjeet Chowdhary, Anna E. Spiro, Liang Yang, Maria D. Chikina, Christophe O. Benoist, Sara Mostafavi

This paper introduces DeepAllele, a deep learning model for allele-specific gene regulation analysis, showing improved detection of cis-regulatory elements in F1 hybrid mice immune cells.

bioRxiv · Apr 9, 2025 · PreprintBioinformatics