Author

Keenan Manpearl

University of Colorado AnschutzORCID 0000-0002-9891-3283Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Organism:bacteria (other)· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Assay:metabolomics· 1

Frequent Co-Authors

Abhirupa GhoshiD· 1 shared Adelle PriceiD· 1 shared Arjun KrishnaniD· 1 shared Audrey E. HendricksiD· 1 shared Charles E. RobertsoniD· 1 shared Charmie K. VangiD· 1 shared Daniel N. FrankiD· 1 shared Emily A BoyeriD· 1 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperBioinformatics

Abhirupa GhoshORCID

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2 papers

Recent·Most cited

From sequence to signature: Machine learning uncovers multiscale feature landscapes that predict AMR across ESKAPE pathogens

Abhirupa Ghosh, Evan Pierce Brenner, Charmie K. Vang, Ethan P Wolfe, Emily A Boyer, Raymond L Lesiyon, Keenan Manpearl, Vignesh Sridhar, Joseph T Burke, Jacob D Krol, J. Bilodeaux, Janani Ravi

This paper uses machine learning to predict antimicrobial resistance (AMR) across ESKAPE pathogens by analyzing genomic data and identifying molecular features associated with drug resistance.

bioRxiv · Jul 3, 2025 · PreprintBioinformatics

Network-based representation learning reveals the impact of age and diet on the gut microbial and metabolomic environment of U.S. infants in a randomized controlled feeding trial

Adelle Price, Sakaiza Rasolofomanana-Rajery, Keenan Manpearl, Charles E. Robertson, Nancy F. Krebs, Daniel N. Frank, Arjun Krishnan, Audrey E. Hendricks, Minghua Tang

The paper uses network representation learning to analyze gut microbiome and metabolomic data from U.S. infants, finding diet type influences microbial and metabolic profiles during complementary feeding.

bioRxiv · Nov 1, 2024 · PreprintMicrobiology