Author

Michele Donato

Stanford MedicineORCID 0000-0002-9968-6027Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genetic & Genomic Medicine· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Research Focus:gene regulatory network inference· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Denis ĐermadiiD· 2 shared Purvesh KhatriiD· 2 shared Aditya RaoiD· 1 shared Ananthakrishnan GanesaniD· 1 shared Benjamin M. P. TangiD· 1 shared Carmen Herrero· 1 shared David Rawling· 1 shared Evangelos J. Giamarellos‐BourboulisiD· 1 shared

Activity by Year

2020-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 38 mutual co-author links

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2 shared papersBioinformatics

Denis ĐermadiORCID

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2 papers

Recent·Most cited

Imputing abundances and inferring direction of associations between histone modifications using neural processes

Ananthakrishnan Ganesan, Denis Đermadi, Laurynas Kalesinskas, Michele Donato, Rosalie Sowers, Paul J. Utz, Purvesh Khatri

The paper develops a framework to impute histone modification abundances and infer directional associations between them using neural processes, identifying novel interactions and changes post-vaccination.

bioRxiv · Jul 21, 2022 · PreprintBioinformatics

A 6-mRNA host response whole-blood classifier trained using patients with non-COVID-19 viral infections accurately predicts severity of COVID-19

Ljubomir J. Buturović, Hong Zheng, Benjamin M. P. Tang, Kevin Lai, Win Sen Kuan, Mark Gillett, Rahul Santram, Maryam Shojaei, Raquel Almansa, Jose Ángel Nieto, Sonsoles Muñoz, Carmen Herrero, Nikolaos Antonakos, Panayiotis Koufargyris, Marina Kontogiorgi, , Timothy E. Sweeney

The paper develops a 6-mRNA classifier using non-COVID-19 viral infection data to predict COVID-19 severity, achieving high accuracy in independent cohorts.

medRxiv · Dec 7, 2020 · PreprintGenetic & Genomic Medicine